Datasets integrated in HeartEXpress

Human


AUTHOR LABEL DESCRIPTION REFERENCE DATABASE ACESSION PUBLICATION
Babiarz et al., 2012 iPS_derived_CM_D0 iPSC-derived cardiomyocytes, Day 0 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

iPS_derived_CM_D3 iPSC-derived cardiomyocytes, Day 3 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

iPS_derived_CM_D7 iPSC-derived cardiomyocytes, Day 7 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

iPS_derived_CM_D10 iPSC-derived cardiomyocytes, Day 10 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

iPS_derived_CM_D14 iPSC-derived cardiomyocytes, Day 14 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

iPS_derived_CM_D20 iPSC-derived cardiomyocytes, Day 20 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

iPS_derived_CM_D28 iPSC-derived cardiomyocytes, Day 28 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

iPS_derived_CM_D35 iPSC-derived cardiomyocytes, Day 35 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

iPS_derived_CM_D45 iPSC-derived cardiomyocytes, Day 45 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

iPS_derived_CM_D60 iPSC-derived cardiomyocytes, Day 60 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

iPS_derived_CM_D90 iPSC-derived cardiomyocytes, Day 90 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

iPS_derived_CM_D120 iPSC-derived cardiomyocytes, Day 120 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

Primary_CM_Passage4 5Primary cardiomyocytes, Passage 4 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

Primary_CM_Passage5 Primary cardiomyocytes, Passage 5 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

Primary_CM_Passage12 Primary cardiomyocytes, Passage 12 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

Fetal_Heart Commercial total RNAs from biopsies, Fetal heart Gene-wise Expression Average GEO GSE35671 PMID: 22050602

Heart_Left_Ventricle Commercial total RNAs from biopsies, Left ventricle Gene-wise Expression Average GEO GSE35671 PMID: 22050602

Heart_1 Commercial total RNAs from biopsies, Heart 1 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

Heart_2 Commercial total RNAs from biopsies, Heart 2 Gene-wise Expression Average GEO GSE35671 PMID: 22050602

Diseased_Heart Commercial total RNAs from biopsies, Heart diseased Gene-wise Expression Average GEO GSE35671 PMID: 22050602
Fu JD et al., 2013 H9F_CM H9 (Cell line) Cardiomyocyte H9F Cardiac Fibroblast GEO GSE49192 PMID: 24319660

hFetal_CM Fetal Human Cardiomyocyte H9F Cardiac Fibroblast GEO GSE49192 PMID: 24319660

H9F_into_CM_2weeks_induction_5TFs H9 fibroblast reprogrammed into cardiomyocyte using GATA4, MEF2C, TBX5, ESRRG and MESP1, 2 weeks induction H9F Cardiac Fibroblast GEO GSE49192 PMID: 24319660

H9F_into_CM_2weeks_induction_7TFs H9 fibroblast reprogrammed into cardiomyocyte using GMTEM, MYOCD and ZFPM2, 2 weeks induction H9F Cardiac Fibroblast GEO GSE49192 PMID: 24319660

hNNDF_into_CM_4weeks_induction_7TFs Neonatal dermal fibroblast reprogrammed into cardiomyocyte using GMTEM, MYOCD and ZFPM2, 4 weeks induction H9F Cardiac Fibroblast GEO GSE49192 PMID: 24319660

hNN_Dermal_Fibroblast Neonatal dermal fibroblast H9F Cardiac Fibroblast GEO GSE49192 PMID: 24319660

H9F_into_CM_12weeks_induction_5TFs H9 fibroblast reprogrammed into cardiomyocyte using GATA4, MEF2C, TBX5, ESRRG and MESP1, 12 weeks induction H9F Cardiac Fibroblast GEO GSE49192 PMID: 24319660

H9F_into_CM_12weeks_induction_7TFs H9 fibroblast reprogrammed into cardiomyocyte using GMTEM, MYOCD and ZFPM2, 12 weeks induction H9F Cardiac Fibroblast GEO GSE49192 PMID: 24319660

hNNDF_iCM12W_7F Neonatal dermal fibroblast reprogrammed into cardiomyocyte using GMTEM, MYOCD and ZFPM2, 12 weeks induction H9F Cardiac Fibroblast GEO GSE49192 PMID: 24319660
Gu et al., 2013 hESC_derived_CM H9 hESC derived cardiomyocyte hESCs_derived_CM vs. hESCs GEO GSE48257 PMID: 23982742
Uosaki et al., 2012 hiPSC_Diff_into_CM_Day0 Human induced pluripotent stem cell differentiation into cardiomyocytes - Day 0 Gene-wise Expression Average GEO GSE28191 PMID: 21876760

hiPSC_Diff_into_CM_Day2 Human induced pluripotent stem cell differentiation into cardiomyocytes - Day 2 Gene-wise Expression Average GEO GSE28191 PMID: 21876760

hiPSC_Diff_into_CM_Day5 Human induced pluripotent stem cell differentiation into cardiomyocytes - Day 5 Gene-wise Expression Average GEO GSE28191 PMID: 21876760

hiPSC_Diff_into_CM_Day7 Human induced pluripotent stem cell differentiation into cardiomyocytes - Day 7 Gene-wise Expression Average GEO GSE28191 PMID: 21876760

hiPSC_Diff_into_CM_Day9 Human induced pluripotent stem cell differentiation into cardiomyocytes - Day 9 Gene-wise Expression Average GEO GSE28191 PMID: 21876760

hiPSC_Diff_into_CM_Day11 Human induced pluripotent stem cell differentiation into cardiomyocytes - Day 11 Gene-wise Expression Average GEO GSE28191 PMID: 21876760
Muraoka et al., 2014 Heart Heart Human Cardiac Fibroblast GEO GSE56874 PMID: 24920580

hCF_into_CM_using_GMTMM_TFs Human cardiac fibroblast reprogrammed into cardiomyocyte using GATA4, MEF2C, TBX5, MESP1 and MYOCD Human Cardiac Fibroblast GEO GSE56874 PMID: 24920580

hCF_into_CM_using_GMTMM_miR133 Human cardiac fibroblast reprogrammed into cardiomyocyte using GATA4, MEF2C, TBX5, MESP1, MYOCD and miR-133 Human Cardiac Fibroblast GEO GSE56874 PMID: 24920580

hCF_into_CM_using_GMTMM_miR133_S Human cardiac fibroblast reprogrammed into cardiomyocyte using GATA4, MEF2C, TBX5, MESP1, MYOCD, miR-133 and SNAI1 Human Cardiac Fibroblast GEO GSE56874 PMID: 24920580
Nam et al., 2013 Adult_Heart Adult heart Human Foreskin Fibroblast GEO GSE43588 PMID: 23487791

HFF_Reprogram_using_GHMTM HFF reprogrammed into cardiomyocyte using GATA4, HAND2, MEF2C, TBX5, and MYOCARDIN Human Foreskin Fibroblast GEO GSE43588 PMID: 23487791
Poon et al., 2013 ESCs_derived_Ventricular_CM Embryonic stem cell derived ventricular-like cardiomyocyte hESCs GEO GSE50704 PMID: 24204964

Human_FetalVentricular_CM Fetal ventricular cardiac tissue hESCs GEO GSE50704 PMID: 24204964

Human_AdultVentricular_CM Adult ventricular cardiac tissue hESCs GEO GSE50704 PMID: 24204964
Sun et al., 2012 hiPSCs_derived_CM Cardiomyocytes derived from normal iPSC hiPSCs GEO GSE35108 PMID: 22517884

hiPSCs_derived_CM_treated_with_Serca2a Cardiomyocytes derived from normal iPSC treated by Serca2a hiPSCs GEO GSE35108 PMID: 22517884

DCM_hiPSCs_derived_CM Cardiomyocytes derived from dialated cardiomyopathy iPSC hiPSCs GEO GSE35108 PMID: 22517884

DCM_hiPSCs_derived_CM_treated_with_Serca2a Cardiomyocytes derived from dialated cardiomyopathy iPSC treated by Serca2a hiPSCs GEO GSE35108 PMID: 22517884



Mouse


AUTHOR LABEL DESCRIPTION REFERENCE DATABASE ACESSION PUBLICATION
Addis et al., 2013 MEFs_treated_with_Gata4_Mef2c_Tbx5 Mouse Embryonic Fibroblasts treated with Gata4, Mef2c and Tbx5 MEFs GEO GSE45274 PMID: 23591016

MEFs_treated_with_Nkx2-5_GMT Mouse Embryonic Fibroblasts treated with Nkx2-5, Gata4, Mef2c and Tbx5 MEFs GEO GSE45274 PMID: 23591016

MEFs_treated_with_Hand2_GMT Mouse Embryonic Fibroblasts treated with Hand2, Gata4, Mef2c and Tbx5 MEFs GEO GSE45274 PMID: 23591016

MEFs_treated_with_HNGMT Mouse Embryonic Fibroblasts treated with Hand2, Nkx2-5, Gata4, Mef2c and Tbx5 MEFs GEO GSE45274 PMID: 23591016

MEFs_treated_with_Myocd_Mef2c_Tbx5 Mouse Embryonic Fibroblasts treated with Myocardin, Mef2c and Tbx5 MEFs GEO GSE45274 PMID: 23591016

MEFs_treated_with_Nkx2-5_DMT Mouse Embryonic Fibroblasts treated with Myocardin, Mef2c, Nkx2.5 and Tbx5 MEFs GEO GSE45274 PMID: 23591016
Cattaneo et al., 2014 Purified_NeoCM Purified neonatal mouse cardiomyocytes mESCs GEO GSE44829 PMID: 25526092

Purified_AdultCM Purified adult mouse cardiomyocytes mESCs GEO GSE44829 PMID: 25526092
Christoforou et al., 2013 Gata4_Tbx5_Mef5c_OverExpression_in_MEFs Overexpression of Gata4, Tbx5, Mef2c in Mouse Embryonic Fibroblasts MEFs GEO GSE44401 PMID: 23704920

GTM_MyoCD_Srf1_OverExpression_in_MEFs Overexpression of Gata4, Tbx5, Mef2c, Mesp1, Smarcd3 in Mouse Embryonic Fibroblasts MEFs GEO GSE44401 PMID: 23704920

GTMMS_Meps1_Smarcd3_OverExpression_in_MEFs Overexpression of Gata4, Tbx5, Mef2c, Mesp1, Smarcd3, Myocd, Srf in Mouse Embryonic Fibroblasts MEFs GEO GSE44401 PMID: 23704920
Domain et al., 2009 First(Nkx2-5)_and_Second(Isl1)_Heart_Field_Markers Second heart field specific reporter dsRed positive (Isl1), cardiac specific enhancer eGFP positive (Nkx2-5) negative control (R-/G-) GEO GSE17513 PMID: 19833966

Second_Heart_Field_Marker(Isl1) Second heart field specific reporter dsRed positive (Isl1), cardiac specific enhancer eGFP negative (Nkx2-5) negative control (R-/G-) GEO GSE17513 PMID: 19833966

First_Heart_Field_Marker(Nkx2-5) Second heart field specific reporter dsRed negative (Isl1), cardiac specific enhancer eGFP positive (Nkx2-5) negative control (R-/G-) GEO GSE17513 PMID: 19833966
Faustino et al., 2008 mESCs_Diff_in_Lif_Free_Day5 Differentiation of embryonic stem cell without LIF at Day 5 mESCs GEO GSE6689 PMID: 18184438

Cardiopoietic_cells_Diff_using_GrowthFactorStimuli_Day5 Differentiation of Cardiopoietic cell using growth factor stimulation at day 5 mESCs GEO GSE6689 PMID: 18184438

Cardiomyocyte_cells_Diff_using_GrowthFactorStimuli_Day9 Differentiation of Cardiomyocyte cell using growth factor stimulation at day 9 mESCs GEO GSE6689 PMID: 18184438
Fu Y et al., 2015 Chemical_Induced_CMs Chemical Induced Cardiomyocytes mESCs GEO GSE69924 PMID: 26292833

CMs Cardiomyocytes mESCs GEO GSE69924 PMID: 26292833
Gan et al., 2014 mESCs_Diff_to_CMDay0 Mouse embryonic stem cell differentiation into cardiomyocyte at day 0 Gene-wise Expression Average GEO GSE58300 PMID: 25058891

mESCs_Diff_to_CMDay12 Mouse embryonic stem cell differentiation into cardiomyocyte at day 12 Gene-wise Expression Average GEO GSE58300 PMID: 25058891

mESCs_Diff_to_CMDay19 Mouse embryonic stem cell differentiation into cardiomyocyte at day 19 Gene-wise Expression Average GEO GSE58300 PMID: 25058891

mESCs_Diff_to_CMDay26 Mouse embryonic stem cell differentiation into cardiomyocyte at day 26 Gene-wise Expression Average GEO GSE58300 PMID: 25058891
Harvard,. 2004 Heart_Diff_At_Day10 Heart differentiation at day 10 Gene-wise Expression Average GEO GSE1479 N/A

Heart_Diff_At_Day11 Heart differentiation at day 11 Gene-wise Expression Average GEO GSE1479 N/A

Heart_Diff_At_Day12V Heart differentiation at day 12 Ventricle Gene-wise Expression Average GEO GSE1479 N/A

Heart_Diff_At_Day12A Heart differentiation at day 12 Atrium Gene-wise Expression Average GEO GSE1479 N/A

Heart_Diff_At_Day13V Heart differentiation at day 13 Ventricle Gene-wise Expression Average GEO GSE1479 N/A

Heart_Diff_At_Day13A Heart differentiation at day 13 Atrium Gene-wise Expression Average GEO GSE1479 N/A

Heart_Diff_At_Day14V Heart differentiation at day 14 Ventricle Gene-wise Expression Average GEO GSE1479 N/A

Heart_Diff_At_Day14A Heart differentiation at day 14 Atrium Gene-wise Expression Average GEO GSE1479 N/A

Heart_Diff_At_Day16V Heart differentiation at day 16 Ventricle Gene-wise Expression Average GEO GSE1479 N/A

Heart_Diff_At_Day16A Heart differentiation at day 16 Atrium Gene-wise Expression Average GEO GSE1479 N/A

Heart_Diff_At_Day18V Heart differentiation at day 18 Ventricle Gene-wise Expression Average GEO GSE1479 N/A

Heart_Diff_At_Day18A Heart differentiation at day 18 Atrium Gene-wise Expression Average GEO GSE1479 N/A
Gaspar et al., 2012 mESCdiff.Day0 Mouse embryonic stem cell differentiation - Day 0 Gene-wise Expression Average ArrayExpress E-TABM-672 PMID: 22420508

mESCdiff.Day1 Mouse embryonic stem cell differentiation - Day 1 Gene-wise Expression Average ArrayExpress E-TABM-672 PMID: 22420508

mESCdiff.Day2 Mouse embryonic stem cell differentiation - Day 2 Gene-wise Expression Average ArrayExpress E-TABM-672 PMID: 22420508

mESCdiff.Day3 Mouse embryonic stem cell differentiation - Day 3 Gene-wise Expression Average ArrayExpress E-TABM-672 PMID: 22420508

mESCdiff.Day4 Mouse embryonic stem cell differentiation - Day 4 Gene-wise Expression Average ArrayExpress E-TABM-672 PMID: 22420508

mESCdiff.Day5 Mouse embryonic stem cell differentiation - Day 5 Gene-wise Expression Average ArrayExpress E-TABM-672 PMID: 22420508

mESCdiff.Day6 Mouse embryonic stem cell differentiation - Day 6 Gene-wise Expression Average ArrayExpress E-TABM-672 PMID: 22420508

mESCdiff.Day7 Mouse embryonic stem cell differentiation - Day 7 Gene-wise Expression Average ArrayExpress E-TABM-672 PMID: 22420508

mESCdiff.Day10 Mouse embryonic stem cell differentiation - Day 10 Gene-wise Expression Average ArrayExpress E-TABM-672 PMID: 22420508
Ieda et al., 2011 NNC Neo natal cardiomyocytes Neonatal Cardiac Fibroblast GEO GSE22292 PMID: 20691899

CF_to_iCM_GMT_2weeks 2 weeks cardiac fibroblast transdifferentiated into induced cardiomyocytes with Gata4/Mef2c/Tbx5 transcription factors Neonatal Cardiac Fibroblast GEO GSE22292 PMID: 20691899

CF_to_iCM_GMT_4weeks 4 weeks cardiac fibroblast transdifferentiated into induced cardiomyocytes with Gata4/Mef2c/Tbx5 transcription factors Neonatal Cardiac Fibroblast GEO GSE22292 PMID: 20691899

CF_Fail_reprogram_to_CM_2weeks 2 weeks cardiac fibroblast that failed to reprogram into cardiomyocytes Neonatal Cardiac Fibroblast GEO GSE22292 PMID: 20691899

CF_Fail_reprogram_to_CM_4weeks 3 weeks cardiac fibroblast that failed to reprogram into cardiomyocytes Neonatal Cardiac Fibroblast GEO GSE22292 PMID: 20691899
Ifkovits et al., 2014 MEF_HNGMT Mouse Embryonic Fibroblasts treated with Hand2, Nkx2-5, Gata4, Mef2c and Tbx5 Respective Control (MEF 0F DMSO) GEO GSE54022 PMID: 24586958

MEF_HNGMT_TGFb Mouse Embryonic Fibroblasts treated with Hand2, Nkx2-5, Gata4, Mef2c, Tbx5 and TGFb Respective Control (MEF 0F TGFb) GEO GSE54022 PMID: 24586958

MEF_HNGMT_SB Mouse Embryonic Fibroblasts treated with Hand2, Nkx2-5, Gata4, Mef2c, Tbx5 and inhibitor SB Respective Control (MEF 0F SB) GEO GSE54022 PMID: 24586958

CF_HNGMT Cardiac Fibroblasts treated with Hand2, Nkx2-5, Gata4, Mef2c and Tbx5 Respective Control (MEF 0F DMSO) GEO GSE54022 PMID: 24586958

CF_HNGMT_TGFb Cardiac Fibroblasts treated with Hand2, Nkx2-5, Gata4, Mef2c, Tbx5 and TGFb Respective Control (MEF 0F TGFb) GEO GSE54022 PMID: 24586958

CF_HNGMT_SB Cardiac Fibroblasts treated with Hand2, Nkx2-5, Gata4, Mef2c, Tbx5 and inhibitor SB Respective Control (MEF 0F SB) GEO GSE54022 PMID: 24586958
Li et al., 2014 E8.5_WH Mouse E8.5 whole heart tissue (heart tube) Gene-wise Expression Average GEO GSE51483 PMID: 24803680

E9.5_LV Mouse E9.5 left ventricle tissue Gene-wise Expression Average GEO GSE51483 PMID: 24803680

E9.5_RV Mouse E9.5 right ventricle tissue Gene-wise Expression Average GEO GSE51483 PMID: 24803680

E12.5_LV Mouse E12.5 left ventricle tissue Gene-wise Expression Average GEO GSE51483 PMID: 24803680

E12.5_RV Mouse E12.5 right ventricle tissue Gene-wise Expression Average GEO GSE51483 PMID: 24803680

E14.5_LV Mouse E14.5 left ventricle tissue Gene-wise Expression Average GEO GSE51483 PMID: 24803680

E14.5_RV Mouse E14.5 right ventricle tissue Gene-wise Expression Average GEO GSE51483 PMID: 24803680

E18.5_LV Mouse E18.5 left ventricle tissue Gene-wise Expression Average GEO GSE51483 PMID: 24803680

E18.5_RV Mouse E18.5 right ventricle tissue Gene-wise Expression Average GEO GSE51483 PMID: 24803680

AB3DLV Mouse left ventricle tissue at 3 days after birth Gene-wise Expression Average GEO GSE51483 PMID: 24803680

AB3DRV Mouse right ventricle tissue at 3 days after birth Gene-wise Expression Average GEO GSE51483 PMID: 24803680

AHLV Adult mouse heart left ventricle tissue Gene-wise Expression Average GEO GSE51483 PMID: 24803680

AHRV Adult mouse heart right ventricle tissue Gene-wise Expression Average GEO GSE51483 PMID: 24803680
Qian et al., 2012 Wildtype_CM Cardiomyocyte Wildtype WT Cardiac Fibroblast GEO GSE49192 PMID: 22522929

induced_CM induced Cardiomyocyte WT Cardiac Fibroblast GEO GSE49192 PMID: 22522929
Song et al., 2012 mACF_0TranscriptionFactors Adult cardiac fibroblast with empty vector Adult Cardiac Fibroblast GEO GSE37057 PMID: 22660318

mACFGHMT Adult cardiac fibroblast transdifferatiated with the transcription factors Gata4/Hand2/Mef2c/Tbx5 Adult Cardiac Fibroblast GEO GSE37057 PMID: 22660318

Adult_Heart Adult heart Adult Cardiac Fibroblast GEO GSE37057 PMID: 22660318
Zhou et al., 2012 Tbx5_2weeks_induction Tbx5 transfected 10T1/2 cells, 2weeks induction Control (Lacz Vector and no Tfs) GEO GSE27329 PMID: 23144723

Gata4_2weeks_induction Gata4 transfected 10T1/2 cells, 2weeks induction Control (Lacz Vector and no Tfs) GEO GSE27329 PMID: 23144723

Myocardin_2weeks_induction Myocardin transfected 10T1/2 cells, 2weeks induction Control (Lacz Vector and no Tfs) GEO GSE27329 PMID: 23144723

TG_2weeks_induction Tbx5+Gata4 transfected 10T1/2 cells, 2weeks induction Control (Lacz Vector and no Tfs) GEO GSE27329 PMID: 23144723

GM_2weeks_induction Gata4+Myocardin transfected 10T1/2 cells, 2weeks induction Control (Lacz Vector and no Tfs) GEO GSE27329 PMID: 23144723

TM_2weeks_induction Tbx5+Myocardin transfected 10T1/2 cells, 2weeks induction Control (Lacz Vector and no Tfs) GEO GSE27329 PMID: 23144723

TGM_2weeks_induction Tbx5+Gata4+Myocardin transfected 10T1/2 cells, 2weeks induction Control (Lacz Vector and no Tfs) GEO GSE27329 PMID: 23144723